A Semi-Automated Approach for Anatomical Ontology Mapping

Petrov Peter; Krachunov Milko; Vassilev Dimitar

doi:10.1515/jib-2013-221

Journal of Integrative Bioinformatics (Jun 2013)

A Semi-Automated Approach for Anatomical Ontology Mapping

Petrov Peter,
Krachunov Milko,
Vassilev Dimitar

Affiliations

Petrov Peter: Faculty of Mathematics and Informatics, Sofia University “St. Kliment Ohridski”, 5 James Bourchier Blvd., 1164, Sofia, http://fmi.uni-sofia.bg/, Bulgaria
Krachunov Milko: Faculty of Mathematics and Informatics, Sofia University “St. Kliment Ohridski”, 5 James Bourchier Blvd., 1164, Sofia, http://fmi.uni-sofia.bg/, Bulgaria
Vassilev Dimitar: Bioinformatics group, Agro Bio Institute, 8 Dragan Tsankov Blvd., 1164, Sofia, http://abi.bg/, Bulgaria,

DOI: https://doi.org/10.1515/jib-2013-221
Journal volume & issue: Vol. 10, no. 2
pp. 71 – 81

Abstract

Read online

This paper presents a study in the domain of semi-automated and fully-automated ontology mapping. A process for inferring additional cross-ontology links within the domain of anatomical ontologies is presented and evaluated on pairs from three model organisms. The results of experiments performed with various external knowledge sources and scoring schemes are discussed.

Published in Journal of Integrative Bioinformatics

ISSN: 1613-4516 (Online)
Publisher: De Gruyter
Country of publisher: Germany
LCC subjects: Technology: Chemical technology: Biotechnology
Website: https://www.degruyter.com/view/j/jib

About the journal