Genome sequence and description of Coprococcus phoceensis gen. nov., sp. nov., a new bacterial genus isolated from the human left colon

M. Bonnet; D. Ricaboni; M. Mailhe; V. Vitton; A. Benezech; J. Delerce; D. Raoult; N. Cassir; B. Lascola; S. Khelaifia

New Microbes and New Infections (Jul 2019)

Genome sequence and description of Coprococcus phoceensis gen. nov., sp. nov., a new bacterial genus isolated from the human left colon

M. Bonnet,
D. Ricaboni,
M. Mailhe,
V. Vitton,
A. Benezech,
J. Delerce,
D. Raoult,
N. Cassir,
B. Lascola,
S. Khelaifia

Affiliations

M. Bonnet: Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France
D. Ricaboni: Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France; Institut Hospitalo-Universitaire Méditerranée Infection, Marseillle, France; Département des sciences cliniques et biomédicales, Luigi Sacco, Division des Maladies Infectieuses III, Université de Milan, Milan, Italy
M. Mailhe: Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France
V. Vitton: Service de Gastroentérologie, Hopital Nord, Assistance Publique-Hopitaux de Marseille, Marseille, France
A. Benezech: Service de Gastroentérologie, Hopital Nord, Assistance Publique-Hopitaux de Marseille, Marseille, France
J. Delerce: Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France
D. Raoult: Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France; Institut Hospitalo-Universitaire Méditerranée Infection, Marseillle, France
N. Cassir: Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France
B. Lascola: Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France
S. Khelaifia: Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France; Institut Hospitalo-Universitaire Méditerranée Infection, Marseillle, France; Corresponding author: S. Khelaifia, Institut Hospitalo-Universitaire Méditerranée Infection, 19–21 Boulevard Jean Moulin, 13385 Marseille cedex 5, France.

Journal volume & issue: Vol. 30

Abstract

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We report here the main characteristics of Coprococcus phoceensis strain Marseille-P3062T (CSUR P3062). The 16S rDNA sequencing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry spectrum analysis were used to identify and characterize this new anaerobic bacterial species, which was isolated from the left colon cleansing of a 25-year-old French man with Crohn's disease. Keywords: Coprococcus phoceensis, culturomics, genome, gut microbiota, taxonogenomics

Published in New Microbes and New Infections

ISSN: 2052-2975 (Online)
Publisher: Elsevier
Country of publisher: United Kingdom
LCC subjects: Medicine: Internal medicine: Infectious and parasitic diseases
Website: https://www.sciencedirect.com/journal/new-microbes-and-new-infections

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