Frontiers in Microbiology (Aug 2021)

Novel Klebsiella pneumoniae K23-Specific Bacteriophages From Different Families: Similarity of Depolymerases and Their Therapeutic Potential

  • Roman B. Gorodnichev,
  • Nikolay V. Volozhantsev,
  • Valentina M. Krasilnikova,
  • Ivan N. Bodoev,
  • Maria A. Kornienko,
  • Nikita S. Kuptsov,
  • Anastasia V. Popova,
  • Galina I. Makarenko,
  • Alexander I. Manolov,
  • Pavel V. Slukin,
  • Dmitry A. Bespiatykh,
  • Vladimir V. Verevkin,
  • Egor A. Denisenko,
  • Eugene E. Kulikov,
  • Vladimir A. Veselovsky,
  • Maja V. Malakhova,
  • Ivan A. Dyatlov,
  • Elena N. Ilina,
  • Egor A. Shitikov

DOI
https://doi.org/10.3389/fmicb.2021.669618
Journal volume & issue
Vol. 12

Abstract

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Antibiotic resistance is a major public health concern in many countries worldwide. The rapid spread of multidrug-resistant (MDR) bacteria is the main driving force for the development of novel non-antibiotic antimicrobials as a therapeutic alternative. Here, we isolated and characterized three virulent bacteriophages that specifically infect and lyse MDR Klebsiella pneumoniae with K23 capsule type. The phages belonged to the Autographiviridae (vB_KpnP_Dlv622) and Myoviridae (vB_KpnM_Seu621, KpS8) families and contained highly similar receptor-binding proteins (RBPs) with polysaccharide depolymerase enzymatic activity. Based on phylogenetic analysis, a similar pattern was also noted for five other groups of depolymerases, specific against capsule types K1, K30/K69, K57, K63, and KN2. The resulting recombinant depolymerases Dep622 (phage vB_KpnP_Dlv622) and DepS8 (phage KpS8) demonstrated narrow specificity against K. pneumoniae with capsule type K23 and were able to protect Galleria mellonella larvae in a model infection with a K. pneumoniae multidrug-resistant strain. These findings expand our knowledge of the diversity of phage depolymerases and provide further evidence that bacteriophages and phage polysaccharide depolymerases represent a promising tool for antimicrobial therapy.

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