Scientific Reports (May 2022)

Development of a system for the automated identification of herbarium specimens with high accuracy

  • Masato Shirai,
  • Atsuko Takano,
  • Takahide Kurosawa,
  • Masahito Inoue,
  • Shuichiro Tagane,
  • Tomoya Tanimoto,
  • Tohru Koganeyama,
  • Hirayuki Sato,
  • Tomohiko Terasawa,
  • Takehito Horie,
  • Isao Mandai,
  • Takashi Akihiro

DOI
https://doi.org/10.1038/s41598-022-11450-y
Journal volume & issue
Vol. 12, no. 1
pp. 1 – 14

Abstract

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Abstract Herbarium specimens are dried plants mounted onto paper. They are used by a limited number of researchers, such as plant taxonomists, as a source of information on morphology and distribution. Recently, digitised herbarium specimens have begun to be used in comprehensive research to address broader issues. However, some specimens have been misidentified, and if used, there is a risk of drawing incorrect conclusions. In this study, we successfully developed a system for identifying taxon names with high accuracy using an image recognition system. We developed a system with an accuracy of 96.4% using 500,554 specimen images of 2171 plant taxa (2064 species, 9 subspecies, 88 varieties, and 10 forms in 192 families) that grow in Japan. We clarified where the artificial intelligence is looking to make decisions, and which taxa is being misidentified. As the system can be applied to digitalised images worldwide, it is useful for selecting and correcting misidentified herbarium specimens.