PLoS ONE (Jan 2011)

Estimating incidence curves of several infections using symptom surveillance data.

  • Edward Goldstein,
  • Benjamin J Cowling,
  • Allison E Aiello,
  • Saki Takahashi,
  • Gary King,
  • Ying Lu,
  • Marc Lipsitch

DOI
https://doi.org/10.1371/journal.pone.0023380
Journal volume & issue
Vol. 6, no. 8
p. e23380

Abstract

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We introduce a method for estimating incidence curves of several co-circulating infectious pathogens, where each infection has its own probabilities of particular symptom profiles. Our deconvolution method utilizes weekly surveillance data on symptoms from a defined population as well as additional data on symptoms from a sample of virologically confirmed infectious episodes. We illustrate this method by numerical simulations and by using data from a survey conducted on the University of Michigan campus. Last, we describe the data needs to make such estimates accurate.