BMC Genomics (Aug 2023)

A systematic analysis of the phloem protein 2 (PP2) proteins in Gossypium hirsutum reveals that GhPP2-33 regulates salt tolerance

  • Fei Wei,
  • Pengyun Chen,
  • Hongliang Jian,
  • Xiaohao Guo,
  • Xiaoyan Lv,
  • Boying Lian,
  • Mengxi Sun,
  • Li An,
  • Xinyu Dang,
  • Miaoqian Yang,
  • Hongmei Wu,
  • Nan Zhang,
  • Aimin Wu,
  • Hantao Wang,
  • Liang Ma,
  • Xiaokang Fu,
  • Jianhua Lu,
  • Shuxun Yu,
  • Hengling Wei

DOI
https://doi.org/10.1186/s12864-023-09546-4
Journal volume & issue
Vol. 24, no. 1
pp. 1 – 12

Abstract

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Abstract Background Phloem protein 2 (PP2) proteins play a vital role in the Phloem-based defense (PBD) and participate in many abiotic and biotic stress. However, research on PP2 proteins in cotton is still lacking. Results A total of 25, 23, 43, and 47 PP2 genes were comprehensively identified and characterized in G.arboretum, G.raimondii, G.barbadense, and G.hirsutum. The whole genome duplication (WGD) and allopolyploidization events play essential roles in the expansion of PP2 genes. The promoter regions of GhPP2 genes contain many cis-acting elements related to abiotic stress and the weighted gene co-expression network analysis (WGCNA) analysis displayed that GhPP2s could be related to salt stress. The qRT-PCR assays further confirmed that GhPP2-33 could be dramatically upregulated during the salt treatment. And the virus-induced gene silencing (VIGS) experiment proved that the silencing of GhPP2-33 could decrease salt tolerance. Conclusions The results in this study not only offer new perspectives for understanding the evolution of PP2 genes in cotton but also further explore their function under salt stress.

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