Journal of Agriculture and Food Research (Dec 2023)

Developing a microscope image dataset for fungal spore classification in grapevine using deep learning

  • Alexis Crespo-Michel,
  • Miguel A. Alonso-Arévalo,
  • Rufina Hernández-Martínez

Journal volume & issue
Vol. 14
p. 100805

Abstract

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Grapevine trunk diseases (GTD) result from various fungi invading grapevine wood, leading to a decline in quality and yield. Accurate identification of fungal species is vital for effective disease management. Visual inspection through microscopy is a commonly used method, but distinguishing similar microorganisms within the same genus can be challenging. For precise identification, molecular methods are often required, despite being relatively costly and time-consuming. In this paper, we present a novel method for classifying four species of grapevine wood fungi using deep learning algorithms. We evaluate the performance of four different deep learning architectures, ResNet-50, VGG-16, MobileNet, and InceptionV3, in the classification of grapevine fungal spores from our microscope image dataset. During our tests, the proposed classification methodology achieved an accuracy of up to 97.40 %. Our approach can facilitate the development of more efficient and accurate methods for fungal species identification and has potential applications in viticulture and plant pathology research.

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