Current Directions in Biomedical Engineering (Sep 2022)

Explaining and Evaluating Deep Tissue Classification by Visualizing Activations of Most Relevant Intermediate Layers

  • Mohammed Aliya,
  • Geppert Carol,
  • Hartmann Arnd,
  • Kuritcyn Petr,
  • Bruns Volker,
  • Schmid Ute,
  • Wittenberg Thomas,
  • Benz Michaela,
  • Finzel Bettina

DOI
https://doi.org/10.1515/cdbme-2022-1059
Journal volume & issue
Vol. 8, no. 2
pp. 229 – 232

Abstract

Read online

Deep Learning-based tissue classification may support pathologists in analyzing digitized whole slide images. However, in such critical tasks, only approaches that can be validated by medical experts in advance to deployment, are suitable. We present an approach that contributes to making automated tissue classification more transparent. We step beyond broadly used visualizations for last layers of a convolutional neural network by identifying most relevant intermediate layers applying Grad-CAM. A visual evaluation by a pathologist shows that these layers assign relevance, where important morphological structures are present in case of correct class decisions. We introduce a tool that can be easily used by medical experts for such validation purposes for any convolutional neural network and any layer. Visual explanations for intermediate layers provide insights into a neural network’s decision for histopathological tissue classification. In future research also the context of the input data must be considered.

Keywords