PLoS ONE (Jan 2018)

Classification of crystallization outcomes using deep convolutional neural networks.

  • Andrew E Bruno,
  • Patrick Charbonneau,
  • Janet Newman,
  • Edward H Snell,
  • David R So,
  • Vincent Vanhoucke,
  • Christopher J Watkins,
  • Shawn Williams,
  • Julie Wilson

DOI
https://doi.org/10.1371/journal.pone.0198883
Journal volume & issue
Vol. 13, no. 6
p. e0198883

Abstract

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The Machine Recognition of Crystallization Outcomes (MARCO) initiative has assembled roughly half a million annotated images of macromolecular crystallization experiments from various sources and setups. Here, state-of-the-art machine learning algorithms are trained and tested on different parts of this data set. We find that more than 94% of the test images can be correctly labeled, irrespective of their experimental origin. Because crystal recognition is key to high-density screening and the systematic analysis of crystallization experiments, this approach opens the door to both industrial and fundamental research applications.