Clinical Epigenetics (Sep 2024)

DNAm scores for serum GDF15 and NT-proBNP levels associate with a range of traits affecting the body and brain

  • Danni A. Gadd,
  • Hannah M. Smith,
  • Donncha Mullin,
  • Ola Chybowska,
  • Robert F. Hillary,
  • Dorien M. Kimenai,
  • Elena Bernabeu,
  • Yipeng Cheng,
  • Chloe Fawns-Ritchie,
  • Archie Campbell,
  • Danielle Page,
  • Adele Taylor,
  • Janie Corley,
  • Maria Del C. Valdés-Hernández,
  • Susana Muñoz Maniega,
  • Mark E. Bastin,
  • Joanna M. Wardlaw,
  • Rosie M. Walker,
  • Kathryn L. Evans,
  • Andrew M. McIntosh,
  • Caroline Hayward,
  • Tom C. Russ,
  • Sarah E. Harris,
  • Paul Welsh,
  • Naveed Sattar,
  • Simon R. Cox,
  • Daniel L. McCartney,
  • Riccardo E. Marioni

DOI
https://doi.org/10.1186/s13148-024-01734-7
Journal volume & issue
Vol. 16, no. 1
pp. 1 – 15

Abstract

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Abstract Background Plasma growth differentiation factor 15 (GDF15) and N‐terminal proB‐type natriuretic peptide (NT‐proBNP) are cardiovascular biomarkers that associate with a range of diseases. Epigenetic scores (EpiScores) for GDF15 and NT-proBNP may provide new routes for risk stratification. Results In the Generation Scotland cohort (N ≥ 16,963), GDF15 levels were associated with incident dementia, ischaemic stroke and type 2 diabetes, whereas NT-proBNP levels were associated with incident ischaemic heart disease, ischaemic stroke and type 2 diabetes (all PFDR 95%) with levels of GDF15 and NT-proBNP, respectively. EpiScores for GDF15 and NT-proBNP were trained in a subset of the population. The GDF15 EpiScore replicated protein associations with incident dementia, type 2 diabetes and ischaemic stroke in the Generation Scotland test set (hazard ratios (HR) range 1.36–1.41, PFDR < 0.05). The EpiScore for NT-proBNP replicated the protein association with type 2 diabetes, but failed to replicate an association with ischaemic stroke. EpiScores explained comparable variance in protein levels across both the Generation Scotland test set and the external LBC1936 test cohort (R 2 range of 5.7–12.2%). In LBC1936, both EpiScores were associated with indicators of poorer brain health. Neither EpiScore was associated with incident dementia in the LBC1936 population. Conclusions EpiScores for serum levels of GDF15 and Nt-proBNP associate with body and brain health traits. These EpiScores are provided as potential tools for disease risk stratification.

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