Cohort profile: evaluation of immune response and household transmission of SARS-CoV-2 in Costa Rica: the RESPIRA study
Allan Hildesheim,
Tim Waterboer,
Julia Butt,
Mitchell H Gail,
Alejandro Calderón,
Rolando Herrero,
Carolina Porras,
Bernal Cortes,
Viviana Loría,
Amada Aparicio,
Gloriana Barrientos,
Daniela Retana,
Kaiyuan Sun,
Rebeca Ocampo,
D. Rebecca Prevots,
Michael Zúñiga,
Roy Wong-McClure,
Melvin Morera,
Marco Binder,
Arturo Abdelnour,
Ruth M Pfeiffer,
Cristina Barboza Solís,
Romain Fantin,
Juan Carlos Vanegas,
Rachel Mercado,
Carlos Ávila
Affiliations
Allan Hildesheim
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Tim Waterboer
Infections and Cancer Epidemiology, German Cancer Research Center, Heidelberg, Germany
Julia Butt
Infections and Cancer Epidemiology, German Cancer Research Center, Heidelberg, Germany
Mitchell H Gail
Biostatistics Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA
Alejandro Calderón
Caja Costarricense de Seguro Social, San Jose, Costa Rica
Rolando Herrero
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Carolina Porras
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Bernal Cortes
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Viviana Loría
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Amada Aparicio
Caja Costarricense de Seguro Social, San Jose, Costa Rica
Gloriana Barrientos
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Daniela Retana
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Kaiyuan Sun
Division of International Epidemiology and Population Studies, Fogarty International Center, NIH, Bethesda, Maryland, USA
Rebeca Ocampo
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
D. Rebecca Prevots
Epidemiology and Population Studies Unit, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research, NIAID, National Institutes of Health, Bethesda, Maryland, USA
Michael Zúñiga
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Roy Wong-McClure
Caja Costarricense de Seguro Social, San Jose, Costa Rica
Melvin Morera
Caja Costarricense de Seguro Social, San Jose, Costa Rica
Marco Binder
Virus-Associated Carcinogenesis, German Cancer Research Center, Heidelberg, Germany
Arturo Abdelnour
Hospital Nacional de Niños, Caja Costarricense de Seguro Social, San Jose, Costa Rica
Ruth M Pfeiffer
Biostatistics Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA
Cristina Barboza Solís
Public Health Dental Department, Universidad de Costa Rica, Sabanilla de Montes de Oca, Costa Rica
Romain Fantin
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Juan Carlos Vanegas
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Rachel Mercado
Department of Laboratory Medicine, National Institutes of Health, Bethesda, Maryland, USA
Carlos Ávila
Agencia Costarricense de Investigaciones Biomedicas-Fundacion Inciensa, San Jose, Costa Rica
Purpose The RESPIRA cohort aims to describe the nature, magnitude, time course and efficacy of the immune response to SARS-CoV-2 infection and vaccination, population prevalence, and household transmission of COVID-19.Participants From November 2020, we selected age-stratified random samples of COVID-19 cases from Costa Rica confirmed by PCR. For each case, two population-based controls, matched on age, sex and census tract were recruited, supplemented with hospitalised cases and household contacts. Participants were interviewed and blood and saliva collected for antibodies and PCR tests. Participants will be followed for 2 years to assess antibody response and infection incidence.Findings to date Recruitment included 3860 individuals: 1150 COVID-19 cases, 1999 population controls and 719 household contacts from 304 index cases. The age and regional distribution of cases was as planned, including four age strata, 30% rural and 70% urban. The control cohort had similar sex, age and regional distribution as the cases according to the study design. Among the 1999 controls recruited, 6.8% reported at enrolment having had COVID-19 and an additional 12.5% had antibodies against SARS-CoV-2. Compliance with visits and specimens has been close to 70% during the first 18 months of follow-up. During the study, national vaccination was implemented and nearly 90% of our cohort participants were vaccinated during follow-up.Future plans RESPIRA will enable multiple analyses, including population prevalence of infection, clinical, behavioural, immunological and genetic risk factors for SARS-CoV-2 acquisition and severity, and determinants of household transmission. We are conducting retrospective and prospective assessment of antibody levels, their determinants and their protective efficacy after infection and vaccination, the impact of long-COVID and a series of ancillary studies. Follow-up continues with bimonthly saliva collection for PCR testing and biannual blood collection for immune response analyses. Follow-up will be completed in early 2024.Trial registration number NCT04537338.