Nature Communications (Aug 2019)

A conserved RNA structural motif for organizing topology within picornaviral internal ribosome entry sites

  • Deepak Koirala,
  • Yaming Shao,
  • Yelena Koldobskaya,
  • James R. Fuller,
  • Andrew M. Watkins,
  • Sandip A. Shelke,
  • Evgeny V. Pilipenko,
  • Rhiju Das,
  • Phoebe A. Rice,
  • Joseph A. Piccirilli

DOI
https://doi.org/10.1038/s41467-019-11585-z
Journal volume & issue
Vol. 10, no. 1
pp. 1 – 13

Abstract

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Picornaviruses use modular RNA domains in their internal ribosome entry sites (IRESs) for translation through non-canonical, cap-independent mechanisms. Here the authors report the crystal structure of domain V from the IRES of hepatitis A virus (HAV) ssRNA genome, suggesting that the functional homology among different types of picornaviral IRESs is structure-based.