Nature Communications (Apr 2018)
Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis
- Jack P. Wang,
- Megan L. Matthews,
- Cranos M. Williams,
- Rui Shi,
- Chenmin Yang,
- Sermsawat Tunlaya-Anukit,
- Hsi-Chuan Chen,
- Quanzi Li,
- Jie Liu,
- Chien-Yuan Lin,
- Punith Naik,
- Ying-Hsuan Sun,
- Philip L. Loziuk,
- Ting-Feng Yeh,
- Hoon Kim,
- Erica Gjersing,
- Todd Shollenberger,
- Christopher M. Shuford,
- Jina Song,
- Zachary Miller,
- Yung-Yun Huang,
- Charles W. Edmunds,
- Baoguang Liu,
- Yi Sun,
- Ying-Chung Jimmy Lin,
- Wei Li,
- Hao Chen,
- Ilona Peszlen,
- Joel J. Ducoste,
- John Ralph,
- Hou-Min Chang,
- David C. Muddiman,
- Mark F. Davis,
- Chris Smith,
- Fikret Isik,
- Ronald Sederoff,
- Vincent L. Chiang
Affiliations
- Jack P. Wang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University
- Megan L. Matthews
- Electrical and Computer Engineering, North Carolina State University
- Cranos M. Williams
- Electrical and Computer Engineering, North Carolina State University
- Rui Shi
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University
- Chenmin Yang
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University
- Sermsawat Tunlaya-Anukit
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University
- Hsi-Chuan Chen
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University
- Quanzi Li
- State Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry
- Jie Liu
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University
- Chien-Yuan Lin
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University
- Punith Naik
- Civil, Construction and Environmental Engineering, North Carolina State University
- Ying-Hsuan Sun
- Department of Forestry, National Chung-Hsing University
- Philip L. Loziuk
- Department of Chemistry, W.M. Keck Fourier Transform Mass Spectrometry Laboratory, North Carolina State University
- Ting-Feng Yeh
- School of Forestry and Resource Conservation, National Taiwan University
- Hoon Kim
- Department of Biochemistry, and the DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin
- Erica Gjersing
- National Bioenergy Center, National Renewable Energy Laboratory
- Todd Shollenberger
- National Bioenergy Center, National Renewable Energy Laboratory
- Christopher M. Shuford
- Department of Chemistry, W.M. Keck Fourier Transform Mass Spectrometry Laboratory, North Carolina State University
- Jina Song
- Electrical and Computer Engineering, North Carolina State University
- Zachary Miller
- Department of Forest Biomaterials, North Carolina State University
- Yung-Yun Huang
- Department of Operations Research, North Carolina State University
- Charles W. Edmunds
- Department of Forest Biomaterials, North Carolina State University
- Baoguang Liu
- Department of Forestry, Beihua University
- Yi Sun
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University
- Ying-Chung Jimmy Lin
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University
- Wei Li
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University
- Hao Chen
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University
- Ilona Peszlen
- Department of Forest Biomaterials, North Carolina State University
- Joel J. Ducoste
- Civil, Construction and Environmental Engineering, North Carolina State University
- John Ralph
- Department of Biochemistry, and the DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin
- Hou-Min Chang
- Department of Forest Biomaterials, North Carolina State University
- David C. Muddiman
- Department of Chemistry, W.M. Keck Fourier Transform Mass Spectrometry Laboratory, North Carolina State University
- Mark F. Davis
- Joint BioEnergy Institute, Lawrence Berkeley National Laboratory
- Chris Smith
- Bioinformatics Research Center, North Carolina State University
- Fikret Isik
- Department of Forestry and Environmental Resources, North Carolina State University
- Ronald Sederoff
- Forest Biotechnology Group, Department of Forestry and Environmental Resources, North Carolina State University
- Vincent L. Chiang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University
- DOI
- https://doi.org/10.1038/s41467-018-03863-z
- Journal volume & issue
-
Vol. 9,
no. 1
pp. 1 – 16
Abstract
A systematic analysis of lignin biosynthetic genes to quantitatively understand their effect on wood properties is still lacking. Here, the authors integrate transcriptomic, proteomic, fluxomic and phenomic data to quantify the impact of perturbations of transcript abundance on lignin biosynthesis and wood properties.
