PeerJ (Oct 2016)

A retrospective study detects a novel variant of porcine epidemic diarrhea virus in England in archived material from the year 2000

  • Falko Steinbach,
  • Akbar Dastjerdi,
  • Julie Peake,
  • S. Anna La Rocca,
  • Frank P. Tobin,
  • Jean-Pierre Frossard,
  • Susanna Williamson

DOI
https://doi.org/10.7717/peerj.2564
Journal volume & issue
Vol. 4
p. e2564

Abstract

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Outbreaks of porcine epidemic diarrhea (PED) were first recorded in England in the 1970s and continued to be confirmed until 2002. Retrospective analysis of archived material from one of the last confirmed cases in England in the year 2000 demonstrates the previous existence of a very diverse PED virus strain. Following the outbreaks of PED in North America in 2013, there has been renewed interest in phylogenetic analysis of sequences from PEDV strains worldwide. There is a gap in the available sequence data between the mid 1980s and the mid 2000s. This work is an example of how this gap can be at least partially filled by the examination of archived material.

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