Development of Electrochemical Aptasensor for Lung Cancer Diagnostics in Human Blood
Anastasiia V. Shabalina,
Darya O. Sharko,
Yury E. Glazyrin,
Elena A. Bolshevich,
Oksana V. Dubinina,
Anastasiia M. Kim,
Dmitry V. Veprintsev,
Ivan N. Lapin,
Galina S. Zamay,
Alexey V. Krat,
Sergey S. Zamay,
Valery A. Svetlichnyi,
Anna S. Kichkailo,
Maxim V. Berezovski
Affiliations
Anastasiia V. Shabalina
Siberian Physical-Technical Institute, Tomsk State University, 634050 Tomsk, Russia
Darya O. Sharko
Siberian Physical-Technical Institute, Tomsk State University, 634050 Tomsk, Russia
Yury E. Glazyrin
Federal Research Center, Krasnoyarsk Science Center of the Siberian Branch of the Russian Academy of Science, 660036 Krasnoyarsk, Russia
Elena A. Bolshevich
Siberian Physical-Technical Institute, Tomsk State University, 634050 Tomsk, Russia
Oksana V. Dubinina
Siberian Physical-Technical Institute, Tomsk State University, 634050 Tomsk, Russia
Anastasiia M. Kim
Siberian Physical-Technical Institute, Tomsk State University, 634050 Tomsk, Russia
Dmitry V. Veprintsev
Federal Research Center, Krasnoyarsk Science Center of the Siberian Branch of the Russian Academy of Science, 660036 Krasnoyarsk, Russia
Ivan N. Lapin
Siberian Physical-Technical Institute, Tomsk State University, 634050 Tomsk, Russia
Galina S. Zamay
Federal Research Center, Krasnoyarsk Science Center of the Siberian Branch of the Russian Academy of Science, 660036 Krasnoyarsk, Russia
Alexey V. Krat
Laboratory of Biomolecular and Medical Technologies, Krasnoyarsk State Medical University Named after Prof. V.F. Voyno-Yasenetsky, 660022 Krasnoyarsk, Russia
Sergey S. Zamay
Federal Research Center, Krasnoyarsk Science Center of the Siberian Branch of the Russian Academy of Science, 660036 Krasnoyarsk, Russia
Valery A. Svetlichnyi
Siberian Physical-Technical Institute, Tomsk State University, 634050 Tomsk, Russia
Anna S. Kichkailo
Federal Research Center, Krasnoyarsk Science Center of the Siberian Branch of the Russian Academy of Science, 660036 Krasnoyarsk, Russia
Maxim V. Berezovski
Department of Chemistry and Biomolecular Sciences, University of Ottawa, Ottawa, AB K1N 6N5, Canada
We describe the preparation and characterization of an aptamer-based electrochemical sensor to lung cancer tumor markers in human blood. The highly reproducible aptamer sensing layer with a high density (up to 70% coverage) on the gold electrode was made. Electrochemical methods and confocal laser scanning microscopy were used to study the stability of the aptamer layer structure and binding ability. A new blocking agent, a thiolated oligonucleotide with an unrelated sequence, was applied to fill the aptamer layer’s defects. Electrochemical aptasensor signal processing was enhanced using deep learning and computer simulation of the experimental data array. It was found that the combinations (coupled and tripled) of cyclic voltammogram features allowed for distinguishing between the samples from lung cancer patients and healthy candidates with a mean accuracy of 0.73. The capacitive component from the non-Faradic electrochemical impedance spectroscopy data indicated the tumor marker’s presence in a sample. These findings allowed for the creation of highly informative aptasensors for early lung cancer diagnostics.