Nature Communications (Oct 2019)

Inferring and validating mechanistic models of neural microcircuits based on spike-train data

  • Josef Ladenbauer,
  • Sam McKenzie,
  • Daniel Fine English,
  • Olivier Hagens,
  • Srdjan Ostojic

DOI
https://doi.org/10.1038/s41467-019-12572-0
Journal volume & issue
Vol. 10, no. 1
pp. 1 – 17

Abstract

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It is difficult to fit mechanistic, biophysically constrained circuit models to spike train data from in vivo extracellular recordings. Here the authors present analytical methods that enable efficient parameter estimation for integrate-and-fire circuit models and inference of the underlying connectivity structure in subsampled networks.