Single-cell analysis uncovers that metabolic reprogramming by ErbB2 signaling is essential for cardiomyocyte proliferation in the regenerating heart
Hessel Honkoop,
Dennis EM de Bakker,
Alla Aharonov,
Fabian Kruse,
Avraham Shakked,
Phong D Nguyen,
Cecilia de Heus,
Laurence Garric,
Mauro J Muraro,
Adam Shoffner,
Federico Tessadori,
Joshua Craiger Peterson,
Wendy Noort,
Alberto Bertozzi,
Gilbert Weidinger,
George Posthuma,
Dominic Grün,
Willem J van der Laarse,
Judith Klumperman,
Richard T Jaspers,
Kenneth D Poss,
Alexander van Oudenaarden,
Eldad Tzahor,
Jeroen Bakkers
Affiliations
Hessel Honkoop
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands
Dennis EM de Bakker
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands
Alla Aharonov
Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel
Fabian Kruse
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands
Avraham Shakked
Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel
Phong D Nguyen
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands
Cecilia de Heus
Section Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands
Laurence Garric
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands
Mauro J Muraro
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands
Adam Shoffner
Regeneration Next, Department of Cell Biology, Duke University Medical Center, Durham, United States
Federico Tessadori
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands
Joshua Craiger Peterson
Laboratory for Myology, Department of Human Movement Sciences, Faculty of Behavioural and Movement Sciences, Vrije Universiteit Amsterdam, Amsterdam, Netherlands
Wendy Noort
Laboratory for Myology, Department of Human Movement Sciences, Faculty of Behavioural and Movement Sciences, Vrije Universiteit Amsterdam, Amsterdam, Netherlands
Alberto Bertozzi
Institute of Biochemistry and Molecular Biology, Ulm University, Ulm, Germany
Laboratory for Myology, Department of Human Movement Sciences, Faculty of Behavioural and Movement Sciences, Vrije Universiteit Amsterdam, Amsterdam, Netherlands
Kenneth D Poss
Regeneration Next, Department of Cell Biology, Duke University Medical Center, Durham, United States
Alexander van Oudenaarden
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands
Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands; Department of Medical Physiology, Division of Heart and Lungs, University Medical Center Utrecht, Utrecht, Netherlands
While the heart regenerates poorly in mammals, efficient heart regeneration occurs in zebrafish. Studies in zebrafish have resulted in a model in which preexisting cardiomyocytes dedifferentiate and reinitiate proliferation to replace the lost myocardium. To identify which processes occur in proliferating cardiomyocytes we have used a single-cell RNA-sequencing approach. We uncovered that proliferating border zone cardiomyocytes have very distinct transcriptomes compared to the nonproliferating remote cardiomyocytes and that they resemble embryonic cardiomyocytes. Moreover, these cells have reduced expression of mitochondrial genes and reduced mitochondrial activity, while glycolysis gene expression and glucose uptake are increased, indicative for metabolic reprogramming. Furthermore, we find that the metabolic reprogramming of border zone cardiomyocytes is induced by Nrg1/ErbB2 signaling and is important for their proliferation. This mechanism is conserved in murine hearts in which cardiomyocyte proliferation is induced by activating ErbB2 signaling. Together these results demonstrate that glycolysis regulates cardiomyocyte proliferation during heart regeneration.