Nature Communications (Jan 2018)
A global ocean atlas of eukaryotic genes
- Quentin Carradec,
- Eric Pelletier,
- Corinne Da Silva,
- Adriana Alberti,
- Yoann Seeleuthner,
- Romain Blanc-Mathieu,
- Gipsi Lima-Mendez,
- Fabio Rocha,
- Leila Tirichine,
- Karine Labadie,
- Amos Kirilovsky,
- Alexis Bertrand,
- Stefan Engelen,
- Mohammed-Amin Madoui,
- Raphaël Méheust,
- Julie Poulain,
- Sarah Romac,
- Daniel J. Richter,
- Genki Yoshikawa,
- Céline Dimier,
- Stefanie Kandels-Lewis,
- Marc Picheral,
- Sarah Searson,
- Tara Oceans Coordinators,
- Olivier Jaillon,
- Jean-Marc Aury,
- Eric Karsenti,
- Matthew B. Sullivan,
- Shinichi Sunagawa,
- Peer Bork,
- Fabrice Not,
- Pascal Hingamp,
- Jeroen Raes,
- Lionel Guidi,
- Hiroyuki Ogata,
- Colomban de Vargas,
- Daniele Iudicone,
- Chris Bowler,
- Patrick Wincker
Affiliations
- Quentin Carradec
- CEA - Institut de Biologie François Jacob, Genoscope
- Eric Pelletier
- CEA - Institut de Biologie François Jacob, Genoscope
- Corinne Da Silva
- CEA - Institut de Biologie François Jacob, Genoscope
- Adriana Alberti
- CEA - Institut de Biologie François Jacob, Genoscope
- Yoann Seeleuthner
- CEA - Institut de Biologie François Jacob, Genoscope
- Romain Blanc-Mathieu
- Institute for Chemical Research, Kyoto University
- Gipsi Lima-Mendez
- Department of Microbiology and Immunology, Rega Institute, KU Leuven
- Fabio Rocha
- Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024
- Leila Tirichine
- Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024
- Karine Labadie
- CEA - Institut de Biologie François Jacob, Genoscope
- Amos Kirilovsky
- CEA - Institut de Biologie François Jacob, Genoscope
- Alexis Bertrand
- CEA - Institut de Biologie François Jacob, Genoscope
- Stefan Engelen
- CEA - Institut de Biologie François Jacob, Genoscope
- Mohammed-Amin Madoui
- CEA - Institut de Biologie François Jacob, Genoscope
- Raphaël Méheust
- Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024
- Julie Poulain
- CEA - Institut de Biologie François Jacob, Genoscope
- Sarah Romac
- CNRS, UMR 7144
- Daniel J. Richter
- CNRS, UMR 7144
- Genki Yoshikawa
- Institute for Chemical Research, Kyoto University
- Céline Dimier
- Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024
- Stefanie Kandels-Lewis
- Structural and Computational Biology, European Molecular Biology Laboratory
- Marc Picheral
- Sorbonne Universités, UPMC Université Paris 06, CNRS, Laboratoire d’oceanographie de Villefranche (LOV), Observatoire Océanologique
- Sarah Searson
- Department of Oceanography, University of Hawaii
- Tara Oceans Coordinators
- Olivier Jaillon
- CEA - Institut de Biologie François Jacob, Genoscope
- Jean-Marc Aury
- CEA - Institut de Biologie François Jacob, Genoscope
- Eric Karsenti
- Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024
- Matthew B. Sullivan
- Departments of Microbiology and Civil, Environmental and Geodetic Engineering, Ohio State University
- Shinichi Sunagawa
- Structural and Computational Biology, European Molecular Biology Laboratory
- Peer Bork
- Structural and Computational Biology, European Molecular Biology Laboratory
- Fabrice Not
- CNRS, UMR 7144
- Pascal Hingamp
- Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO
- Jeroen Raes
- Department of Microbiology and Immunology, Rega Institute, KU Leuven
- Lionel Guidi
- Sorbonne Universités, UPMC Université Paris 06, CNRS, Laboratoire d’oceanographie de Villefranche (LOV), Observatoire Océanologique
- Hiroyuki Ogata
- Institute for Chemical Research, Kyoto University
- Colomban de Vargas
- CNRS, UMR 7144
- Daniele Iudicone
- Stazione Zoologica Anton Dohrn, Villa Comunale
- Chris Bowler
- Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l’Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024
- Patrick Wincker
- CEA - Institut de Biologie François Jacob, Genoscope
- DOI
- https://doi.org/10.1038/s41467-017-02342-1
- Journal volume & issue
-
Vol. 9,
no. 1
pp. 1 – 13
Abstract
Marine microbial eukaryotes and zooplankton display enormous diversity and largely unexplored physiologies. Here, the authors use metatranscriptomics to analyze four organismal size fractions from open-ocean stations, providing the largest reference collection of eukaryotic transcripts from any single biome.
