Data in Brief (Apr 2017)
Data on gut metagenomes of the patients with alcoholic dependence syndrome and alcoholic liver cirrhosis
- Alexander V. Tyakht,
- Veronika B. Dubinkina,
- Vera Y. Odintsova,
- Konstantin S. Yarygin,
- Boris A. Kovarsky,
- Alexander V. Pavlenko,
- Dmitry S. Ischenko,
- Anna S. Popenko,
- Dmitry G. Alexeev,
- Anastasiya Y. Taraskina,
- Regina F. Nasyrova,
- Evgeny M. Krupitski,
- Nino V. Shalikiani,
- Igor G. Bakulin,
- Petr L. Shcherbakov,
- Lyubov O. Skorodumova,
- Andrei K. Larin,
- Elena S. Kostryukova,
- Rustam A. Abdulkhakov,
- Sayar R. Abdulkhakov,
- Sergey Y. Malanin,
- Ruzilya K. Ismagilova,
- Tatiana V. Grigoryeva,
- Elena N. Ilina,
- Vadim M. Govorun
Affiliations
- Alexander V. Tyakht
- Moscow Institute of Physics and Technology, Institutskiy per. 9, Dolgoprudny, Moscow Region 141700, Russia
- Veronika B. Dubinkina
- Moscow Institute of Physics and Technology, Institutskiy per. 9, Dolgoprudny, Moscow Region 141700, Russia
- Vera Y. Odintsova
- Federal Research and Clinical Centre of Physical-Chemical Medicine, Malaya Pirogovskaya 1a, Moscow 119435, Russia
- Konstantin S. Yarygin
- Moscow Institute of Physics and Technology, Institutskiy per. 9, Dolgoprudny, Moscow Region 141700, Russia
- Boris A. Kovarsky
- Federal Research and Clinical Centre of Physical-Chemical Medicine, Malaya Pirogovskaya 1a, Moscow 119435, Russia
- Alexander V. Pavlenko
- Moscow Institute of Physics and Technology, Institutskiy per. 9, Dolgoprudny, Moscow Region 141700, Russia
- Dmitry S. Ischenko
- Moscow Institute of Physics and Technology, Institutskiy per. 9, Dolgoprudny, Moscow Region 141700, Russia
- Anna S. Popenko
- Federal Research and Clinical Centre of Physical-Chemical Medicine, Malaya Pirogovskaya 1a, Moscow 119435, Russia
- Dmitry G. Alexeev
- Moscow Institute of Physics and Technology, Institutskiy per. 9, Dolgoprudny, Moscow Region 141700, Russia
- Anastasiya Y. Taraskina
- Saint-Petersburg Bekhterev Psychoneurological Research Institute, Bekhtereva 3, Saint-Petersburg 192019, Russia
- Regina F. Nasyrova
- Saint-Petersburg Bekhterev Psychoneurological Research Institute, Bekhtereva 3, Saint-Petersburg 192019, Russia
- Evgeny M. Krupitski
- Saint-Petersburg Bekhterev Psychoneurological Research Institute, Bekhtereva 3, Saint-Petersburg 192019, Russia
- Nino V. Shalikiani
- Moscow Clinical Scientific Center, Shosse Entuziastov 86, Moscow 111123, Russia
- Igor G. Bakulin
- Moscow Clinical Scientific Center, Shosse Entuziastov 86, Moscow 111123, Russia
- Petr L. Shcherbakov
- Moscow Clinical Scientific Center, Shosse Entuziastov 86, Moscow 111123, Russia
- Lyubov O. Skorodumova
- Federal Research and Clinical Centre of Physical-Chemical Medicine, Malaya Pirogovskaya 1a, Moscow 119435, Russia
- Andrei K. Larin
- Federal Research and Clinical Centre of Physical-Chemical Medicine, Malaya Pirogovskaya 1a, Moscow 119435, Russia
- Elena S. Kostryukova
- Moscow Institute of Physics and Technology, Institutskiy per. 9, Dolgoprudny, Moscow Region 141700, Russia
- Rustam A. Abdulkhakov
- Kazan State Medical University, Butlerova 49, Kazan 420012, Russia
- Sayar R. Abdulkhakov
- Kazan State Medical University, Butlerova 49, Kazan 420012, Russia
- Sergey Y. Malanin
- Kazan Federal University, Kremlyovskaya 18, Kazan 420008, Russia
- Ruzilya K. Ismagilova
- Kazan Federal University, Kremlyovskaya 18, Kazan 420008, Russia
- Tatiana V. Grigoryeva
- Kazan Federal University, Kremlyovskaya 18, Kazan 420008, Russia
- Elena N. Ilina
- Federal Research and Clinical Centre of Physical-Chemical Medicine, Malaya Pirogovskaya 1a, Moscow 119435, Russia
- Vadim M. Govorun
- Moscow Institute of Physics and Technology, Institutskiy per. 9, Dolgoprudny, Moscow Region 141700, Russia
- DOI
- https://doi.org/10.1016/j.dib.2017.01.008
- Journal volume & issue
-
Vol. 11,
no. C
pp. 98 – 102
Abstract
Alcoholism is associated with significant changes in gut microbiota composition. Metagenomic sequencing allows to assess the altered abundance levels of bacterial taxa and genes in a culture-independent way. We collected 99 stool samples from the patients with alcoholic dependence syndrome (n=72) and alcoholic liver cirrhosis (n=27). Each of the samples was surveyed using “shotgun” (whole-genome) sequencing on SOLiD platform. The reads are deposited in the ENA (project ID: PRJEB18041).
Keywords
- Gut microbiota
- Metagenome
- Alcoholism
- Alcohol dependence syndrome
- Alcoholic liver cirrhosis
- Dysbiosis
- “Shotgun” metagenomics
