Nature Communications (Nov 2019)

Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis

  • Jethro S. Johnson,
  • Daniel J. Spakowicz,
  • Bo-Young Hong,
  • Lauren M. Petersen,
  • Patrick Demkowicz,
  • Lei Chen,
  • Shana R. Leopold,
  • Blake M. Hanson,
  • Hanako O. Agresta,
  • Mark Gerstein,
  • Erica Sodergren,
  • George M. Weinstock

DOI
https://doi.org/10.1038/s41467-019-13036-1
Journal volume & issue
Vol. 10, no. 1
pp. 1 – 11

Abstract

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Here, the authors explore the potential of the 16S gene for discriminating bacterial taxa and show that full-length sequencing combined with appropriate clustering of intragenomic sequence variation can provide accurate representation of bacterial species in microbiome datasets.