BMC Genomics
(Apr 2020)
Draft genome sequences of Hirudo medicinalis and salivary transcriptome of three closely related medicinal leeches
Vladislav V. Babenko,
Oleg V. Podgorny,
Valentin A. Manuvera,
Artem S. Kasianov,
Alexander I. Manolov,
Ekaterina N. Grafskaia,
Dmitriy A. Shirokov,
Alexey S. Kurdyumov,
Dmitriy V. Vinogradov,
Anastasia S. Nikitina,
Sergey I. Kovalchuk,
Nickolay A. Anikanov,
Ivan O. Butenko,
Olga V. Pobeguts,
Daria S. Matyushkina,
Daria V. Rakitina,
Elena S. Kostryukova,
Victor G. Zgoda,
Isolda P. Baskova,
Vladimir M. Trukhan,
Mikhail S. Gelfand,
Vadim M. Govorun,
Helgi B. Schiöth,
Vassili N. Lazarev
Affiliations
Vladislav V. Babenko
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Oleg V. Podgorny
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Valentin A. Manuvera
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Artem S. Kasianov
Moscow Institute of Physics and Technology
Alexander I. Manolov
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Ekaterina N. Grafskaia
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Dmitriy A. Shirokov
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Alexey S. Kurdyumov
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Dmitriy V. Vinogradov
A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences
Anastasia S. Nikitina
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Sergey I. Kovalchuk
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Nickolay A. Anikanov
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Ivan O. Butenko
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Olga V. Pobeguts
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Daria S. Matyushkina
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Daria V. Rakitina
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Elena S. Kostryukova
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Victor G. Zgoda
V.N. Orekhovich Research Institute of Biomedical Chemistry, Russian Academy of Medical Sciences
Isolda P. Baskova
Faculty of Biology, Lomonosov Moscow State University
Vladimir M. Trukhan
I.M. Sechenov First Moscow State Medical University of the Ministry of Healthcare of the Russian Federation (Sechenovskiy University)
Mikhail S. Gelfand
A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences
Vadim M. Govorun
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
Helgi B. Schiöth
I.M. Sechenov First Moscow State Medical University of the Ministry of Healthcare of the Russian Federation (Sechenovskiy University)
Vassili N. Lazarev
Federal Research and Clinical Centre of Physical-Chemical Medicine of Federal Medical Biological Agency
DOI
https://doi.org/10.1186/s12864-020-6748-0
Journal volume & issue
Vol. 21,
no. 1
pp.
1
– 16
Abstract
Read online
Abstract Background Salivary cell secretion (SCS) plays a critical role in blood feeding by medicinal leeches, making them of use for certain medical purposes even today. Results We annotated the Hirudo medicinalis genome and performed RNA-seq on salivary cells isolated from three closely related leech species, H. medicinalis, Hirudo orientalis, and Hirudo verbana. Differential expression analysis verified by proteomics identified salivary cell-specific gene expression, many of which encode previously unknown salivary components. However, the genes encoding known anticoagulants have been found to be expressed not only in salivary cells. The function-related analysis of the unique salivary cell genes enabled an update of the concept of interactions between salivary proteins and components of haemostasis. Conclusions Here we report a genome draft of Hirudo medicinalis and describe identification of novel salivary proteins and new homologs of genes encoding known anticoagulants in transcriptomes of three medicinal leech species. Our data provide new insights in genetics of blood-feeding lifestyle in leeches.
Keywords
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