Fidelity of peripheral blood for monitoring genomics and tumor immune‐microenvironment in myelodysplastic syndromes
Sung‐Eun Lee,
Feng Wang,
Abel Trujillo‐Ocampo,
Wilfredo Ruiz‐Vasquez,
Hyun‐Woo Cho,
Koichi Takahashi,
Jeffrey J. Molldrem,
Andrew Futreal,
Guillermo Garcia‐Manero,
Jin S. Im
Affiliations
Sung‐Eun Lee
Department of Stem Cell Transplantation and Cellular Therapy, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Feng Wang
Department of Genomic Medicine, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Abel Trujillo‐Ocampo
Department of Stem Cell Transplantation and Cellular Therapy, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Wilfredo Ruiz‐Vasquez
Department of Stem Cell Transplantation and Cellular Therapy, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Hyun‐Woo Cho
Department of Stem Cell Transplantation and Cellular Therapy, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Koichi Takahashi
Department of Genomic Medicine, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Jeffrey J. Molldrem
Department of Stem Cell Transplantation and Cellular Therapy, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Andrew Futreal
Department of Genomic Medicine, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Guillermo Garcia‐Manero
Department of Leukemia, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Jin S. Im
Department of Stem Cell Transplantation and Cellular Therapy, Division of Cancer Medicine The University of Texas M.D. Anderson Cancer Center Houston Texas USA
Abstract The aim of this study is to investigate whether the peripheral blood (PB) can serve as a surrogate immune‐microenvironment to bone marrow for genetic and immune monitoring in myelodysplastic syndrome (MDS). We compared the composition of T cell subsets and somatic mutation burden in 36 pairs of PB and matching bone marrow aspirate (BMA) using multi‐parameter flow cytometry and NGS‐based targeted sequencing analysis, respectively. Our immune‐subset and NGS‐based mutation analysis of BMA showed significant concordance with those of PB in MDS. Therefore, PB can provide easily accessible tumor immune‐microenvironment for monitoring in the immune and genetic landscapes for MDS patients.