mBio
(Apr 2021)
Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches
Mengting Maggie Yuan,
Anne Kakouridis,
Evan Starr,
Nhu Nguyen,
Shengjing Shi,
Jennifer Pett-Ridge,
Erin Nuccio,
Jizhong Zhou,
Mary Firestone
Affiliations
Mengting Maggie Yuan
Department of Environmental Science, Policy, and Management, University of California, Berkeley, Berkeley, California, USA
Anne Kakouridis
Department of Environmental Science, Policy, and Management, University of California, Berkeley, Berkeley, California, USA
Evan Starr
Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, USA
Nhu Nguyen
Department of Tropical Plants and Soil Sciences, University of Hawaiʻi at Mānoa, Honolulu, Hawaii, USA
Shengjing Shi
AgResearch Ltd., Lincoln Science Centre, Christchurch, New Zealand
Jennifer Pett-Ridge
ORCiD Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA
Erin Nuccio
Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA
Jizhong Zhou
Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA
Mary Firestone
ORCiD Department of Environmental Science, Policy, and Management, University of California, Berkeley, Berkeley, California, USA
DOI
https://doi.org/10.1128/mBio.03509-20
Journal volume & issue
Vol. 12,
no. 2
Abstract
Read online
Soils near living and decomposing roots form distinct niches that promote microorganisms with distinctive environmental preferences and interactions. Yet few studies have assessed the community-level cooccurrence of bacteria and fungi in these soil niches as plant roots grow and senesce.
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