GigaByte (Apr 2022)

Annotation of putative circadian rhythm-associated genes in Diaphorina citri (Hemiptera: Liviidae)

  • Max Reynolds ,
  • Lucas de Oliveira ,
  • Chad Vosburg ,
  • Thomson Paris ,
  • Crissy Massimino ,
  • Jordan Norus ,
  • Yasmin Ortiz ,
  • Michelle Espino ,
  • Nina Davis ,
  • Ron Masse ,
  • Alan Neiman ,
  • Rachel Holcomb ,
  • Kylie Gervais ,
  • Melissa Kemp ,
  • Maria Hoang ,
  • Teresa D. Shippy ,
  • Prashant S. Hosmani ,
  • Mirella Flores-Gonzalez ,
  • Kirsten Pelz-Stelinski ,
  • Jawwad A. Qureshi ,
  • Lukas A. Mueller ,
  • Wayne B. Hunter ,
  • Joshua B. Benoit ,
  • Susan J. Brown ,
  • Tom D’Elia ,
  • Surya Saha

DOI
https://doi.org/10.46471/gigabyte.48

Abstract

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The circadian rhythm involves multiple genes that generate an internal molecular clock, allowing organisms to anticipate environmental conditions produced by the Earth’s rotation on its axis. Here, we present the results of the manual curation of 27 genes that are associated with circadian rhythm in the genome of Diaphorina citri, the Asian citrus psyllid. This insect is the vector for the bacterial pathogen Candidatus Liberibacter asiaticus (CLas), the causal agent of citrus greening disease (Huanglongbing). This disease severely affects citrus industries and has drastically decreased crop yields worldwide. Based on cry1 and cry2 identified in the psyllid genome, D. citri likely possesses a circadian model similar to the lepidopteran butterfly, Danaus plexippus. Manual annotation will improve the quality of circadian rhythm gene models, allowing the future development of molecular therapeutics, such as RNA interference or antisense technologies, to target these genes to disrupt the psyllid biology.