Genetic and cultural adaptations underlie the establishment of dairy pastoralism in the Tibetan Plateau
Min-Sheng Peng,
Yan-Hu Liu,
Quan-Kuan Shen,
Xiao-Hua Zhang,
Jiajia Dong,
Jin-Xiu Li,
Hui Zhao,
Hui Zhang,
Xiaoming Zhang,
Yaoxi He,
Hong Shi,
Chaoying Cui,
Ouzhuluobu,
Tian-Yi Wu,
Shi-Ming Liu,
Gonggalanzi,
Baimakangzhuo,
Caijuan Bai,
Duojizhuoma,
Ti Liu,
Shan-Shan Dai,
Robert W. Murphy,
Xue-Bin Qi,
Guanghui Dong,
Bing Su,
Ya-Ping Zhang
Affiliations
Min-Sheng Peng
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Yan-Hu Liu
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Quan-Kuan Shen
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Xiao-Hua Zhang
State Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University
Jiajia Dong
Key Laboratory of Western China’s Environmental Systems (Ministry of Education), College of Earth and Environmental Sciences, Lanzhou University
Jin-Xiu Li
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Hui Zhao
State Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University
Hui Zhang
State Key Laboratory of Primate Biomedical Research (LPBR), School of Primate Translational Medicine, Kunming University of Science and Technology (KUST)
Xiaoming Zhang
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Yaoxi He
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Hong Shi
State Key Laboratory of Primate Biomedical Research (LPBR), School of Primate Translational Medicine, Kunming University of Science and Technology (KUST)
Chaoying Cui
High Altitude Medical Research Center, School of Medicine, Tibetan University
Ouzhuluobu
High Altitude Medical Research Center, School of Medicine, Tibetan University
Tian-Yi Wu
National Key Laboratory of High Altitude Medicine, High Altitude Medical Research Institute
Shi-Ming Liu
National Key Laboratory of High Altitude Medicine, High Altitude Medical Research Institute
Gonggalanzi
High Altitude Medical Research Center, School of Medicine, Tibetan University
Baimakangzhuo
High Altitude Medical Research Center, School of Medicine, Tibetan University
Caijuan Bai
The First People’s Hospital of Gansu Province
Duojizhuoma
High Altitude Medical Research Center, School of Medicine, Tibetan University
Ti Liu
State Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University
Shan-Shan Dai
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Robert W. Murphy
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Xue-Bin Qi
State Key Laboratory of Primate Biomedical Research (LPBR), School of Primate Translational Medicine, Kunming University of Science and Technology (KUST)
Guanghui Dong
Key Laboratory of Western China’s Environmental Systems (Ministry of Education), College of Earth and Environmental Sciences, Lanzhou University
Bing Su
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Ya-Ping Zhang
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
Abstract Background Domestication and introduction of dairy animals facilitated the permanent human occupation of the Tibetan Plateau. Yet the history of dairy pastoralism in the Tibetan Plateau remains poorly understood. Little is known how Tibetans adapted to milk and dairy products. Results We integrated archeological evidence and genetic analysis to show the picture that the dairy ruminants, together with dogs, were introduced from West Eurasia into the Tibetan Plateau since ~ 3600 years ago. The genetic admixture between the exotic and indigenous dogs enriched the candidate lactase persistence (LP) allele 10974A > G of West Eurasian origin in Tibetan dogs. In vitro experiments demonstrate that − 13838G > A functions as a LP allele in Tibetans. Unlike multiple LP alleles presenting selective signatures in West Eurasians and South Asians, the de novo origin of Tibetan-specific LP allele − 13838G > A with low frequency (~ 6–7%) and absence of selection corresponds − 13910C > T in pastoralists across eastern Eurasia steppe. Conclusions Results depict a novel scenario of genetic and cultural adaptations to diet and expand current understanding of the establishment of dairy pastoralism in the Tibetan Plateau.