PLoS ONE (Jan 2015)

Sparse Zero-Sum Games as Stable Functional Feature Selection.

  • Nataliya Sokolovska,
  • Olivier Teytaud,
  • Salwa Rizkalla,
  • MicroObese consortium,
  • Karine Clément,
  • Jean-Daniel Zucker

DOI
https://doi.org/10.1371/journal.pone.0134683
Journal volume & issue
Vol. 10, no. 9
p. e0134683

Abstract

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In large-scale systems biology applications, features are structured in hidden functional categories whose predictive power is identical. Feature selection, therefore, can lead not only to a problem with a reduced dimensionality, but also reveal some knowledge on functional classes of variables. In this contribution, we propose a framework based on a sparse zero-sum game which performs a stable functional feature selection. In particular, the approach is based on feature subsets ranking by a thresholding stochastic bandit. We provide a theoretical analysis of the introduced algorithm. We illustrate by experiments on both synthetic and real complex data that the proposed method is competitive from the predictive and stability viewpoints.