Nature Communications (Apr 2022)

Population-scale long-read sequencing uncovers transposable elements associated with gene expression variation and adaptive signatures in Drosophila

  • Gabriel E. Rech,
  • Santiago Radío,
  • Sara Guirao-Rico,
  • Laura Aguilera,
  • Vivien Horvath,
  • Llewellyn Green,
  • Hannah Lindstadt,
  • Véronique Jamilloux,
  • Hadi Quesneville,
  • Josefa González

DOI
https://doi.org/10.1038/s41467-022-29518-8
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 16

Abstract

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Even in well-studied species, there is still substantial natural genetic variation that has not been characterized. Here, the authors use long read sequencing to discover transposable elements in the Drosophila genome not detected by short read sequencing, and link them to gene expression.