G3: Genes, Genomes, Genetics (Dec 2022)

Modeling genotype × environment interaction for single and multitrait genomic prediction in potato (<i>Solanum tuberosum</i> L.)

  • Jaime Cuevas,
  • Fredrik Reslow,
  • Jose Crossa,
  • Rodomiro Ortiz

DOI
https://doi.org/10.1093/g3journal/jkac322
Journal volume & issue
Vol. 13, no. 2

Abstract

Read online

AbstractIn this study, we extend research on genomic prediction (GP) to polysomic polyploid plant species with the main objective to investigate single-trait (ST) and multitrait (MT) multienvironment (ME) models using field trial data from 3 locations in Sweden [Helgegården (HEL), Mosslunda (MOS), Umeå (UM)] over 2 years (2020, 2021) of 253 potato cultivars and breeding clones for 5 tuber weight traits and 2 tuber flesh quality characteristics. This research investigated the GP of 4 genome-based prediction models with genotype × environment interactions (GEs): (1) ST reaction norm model (M1M2M2M3M4M4M4M4,M3M2