PLoS ONE (Jan 2021)

The NICU flora: An effective technique to sample surfaces.

  • Naomi Sultan,
  • Irina Shchors,
  • Marc V Assous,
  • Maskit Bar-Meir

DOI
https://doi.org/10.1371/journal.pone.0257821
Journal volume & issue
Vol. 16, no. 9
p. e0257821

Abstract

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ObjectiveEnvironmental surface sampling in healthcare settings is not routinely recommended. There are several methods for environmental surface sampling, however the yield of these methods is not well defined. The aim of the present study is to compare two methods of environmental surface sampling, to characterize the neonatal intensive care unit (NICU) flora, compare it with rates of infection and colonization and correlate it with the workload.Design and settingFirst, the yield of the swab and the gauze-pad methods were compared. Then, longitudinal surveillance of environmental surface sampling was performed over 6 months,once weekly, from pre-specified locations in the NICU. Samples were streaked onto selective media and bacterial colonies were identified using matrix-assisted laser desorption-ionization time-of-flight (MALDI-TOF).ResultsThe number of colonies isolated using the gauze pad method was significantly higher compared with the swab method. Overall, 87 bacterial species of 30 different bacterial genera were identified on the NICU environmental surfaces. Of these, 18% species were potential pathogens, and the other represent skin and environmental flora. In 20% of clinical cultures and in 60% of colonization cultures, the pathogen was isolated from the infant's environment as well. The number of bacteria in environmental cultures was negatively correlated with nurse/patient ratio in the day prior to the culture.ConclusionThe gauze pad method for environmental sampling is robust and readily available. The NICU flora is very diverse and is closely related with the infants' flora, therefore it may serve as a reservoir for potential pathogens.