New Microbes and New Infections (Jan 2018)

Noncontiguous finished genome sequence and description of Mediterranea massiliensis gen. nov., sp. nov., a new member of the Bacteroidaceae family isolated from human colon

  • I.I. Ngom,
  • M. Mailhe,
  • D. Ricaboni,
  • V. Vitton,
  • A. Benezech,
  • S. Khelaifia,
  • C. Michelle,
  • F. Cadoret,
  • N. Armstrong,
  • A. Levasseur,
  • D. Raoult,
  • M. Million

Journal volume & issue
Vol. 21
pp. 105 – 116

Abstract

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Strain Marseille-P2645T was isolated in a colon sample from a Frenchwoman who underwent a colonoscopy. Bacterial cells were Gram negative, non–spore forming, mobile and strictly anaerobic. The genome of strain Marseille-P2645T is 3 950 441 bp long and contains 3374 protein-coding genes. The DNA G+C content is of 51.66 mol%. Strain Marseille-P2645T exhibited a 92.9% sequence similarity with Bacteroides helcogenes strain P36-108T (GenBank accession no. CP002352), the phylogenetically closest species with standing in nomenclature. Strain Marseille-P2645T (= CSUR P2645 = DSM 103034) is therefore a candidate as a type species of a new genus belonging to the Bacteroidaceae family, for which the name of Mediterranea massiliensis gen. nov., sp. nov., is proposed. Keywords: Colon, culturomics, genome, Mediterranea massiliensis gen. nov., sp. nov., taxonogenomics