Nature Communications (Jan 2024)

Human coronavirus OC43-elicited CD4+ T cells protect against SARS-CoV-2 in HLA transgenic mice

  • Rúbens Prince dos Santos Alves,
  • Julia Timis,
  • Robyn Miller,
  • Kristen Valentine,
  • Paolla Beatriz Almeida Pinto,
  • Andrew Gonzalez,
  • Jose Angel Regla-Nava,
  • Erin Maule,
  • Michael N. Nguyen,
  • Norazizah Shafee,
  • Sara Landeras-Bueno,
  • Eduardo Olmedillas,
  • Brett Laffey,
  • Katarzyna Dobaczewska,
  • Zbigniew Mikulski,
  • Sara McArdle,
  • Sarah R. Leist,
  • Kenneth Kim,
  • Ralph S. Baric,
  • Erica Ollmann Saphire,
  • Annie Elong Ngono,
  • Sujan Shresta

DOI
https://doi.org/10.1038/s41467-024-45043-2
Journal volume & issue
Vol. 15, no. 1
pp. 1 – 20

Abstract

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Abstract SARS-CoV-2-reactive T cells are detected in some healthy unexposed individuals. Human studies indicate these T cells could be elicited by the common cold coronavirus OC43. To directly test this assumption and define the role of OC43-elicited T cells that are cross-reactive with SARS-CoV-2, we develop a model of sequential infections with OC43 followed by SARS-CoV-2 in HLA-B*0702 and HLA-DRB1*0101 Ifnar1 −/− transgenic mice. We find that OC43 infection can elicit polyfunctional CD8+ and CD4+ effector T cells that cross-react with SARS-CoV-2 peptides. Furthermore, pre-exposure to OC43 reduces subsequent SARS-CoV-2 infection and disease in the lung for a short-term in HLA-DRB1*0101 Ifnar1 −/− transgenic mice, and a longer-term in HLA-B*0702 Ifnar1 −/− transgenic mice. Depletion of CD4+ T cells in HLA-DRB1*0101 Ifnar1 −/− transgenic mice with prior OC43 exposure results in increased viral burden in the lung but no change in virus-induced lung damage following infection with SARS-CoV-2 (versus CD4+ T cell-sufficient mice), demonstrating that the OC43-elicited SARS-CoV-2 cross-reactive T cell-mediated cross-protection against SARS-CoV-2 is partially dependent on CD4+ T cells. These findings contribute to our understanding of the origin of pre-existing SARS-CoV-2-reactive T cells and their effects on SARS-CoV-2 clinical outcomes, and also carry implications for development of broadly protective betacoronavirus vaccines.