Nature Communications (Aug 2021)

Sc-compReg enables the comparison of gene regulatory networks between conditions using single-cell data

  • Zhana Duren,
  • Wenhui Sophia Lu,
  • Joseph G. Arthur,
  • Preyas Shah,
  • Jingxue Xin,
  • Francesca Meschi,
  • Miranda Lin Li,
  • Corey M. Nemec,
  • Yifeng Yin,
  • Wing Hung Wong

DOI
https://doi.org/10.1038/s41467-021-25089-2
Journal volume & issue
Vol. 12, no. 1
pp. 1 – 13

Abstract

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Changes in cell state underlie the difference between health and disease. Here, the authors propose a computational framework for the integration of gene expression and chromatin-accessibility data from single cells to identify differences in gene regulation in cell types across two conditions.