A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology

Sara Calhoun; Tisza Ann Szeremy Bell; Lukas R. Dahlin; Yuliya Kunde; Kurt LaButti; Katherine B. Louie; Andrea Kuftin; Daniel Treen; David Dilworth; Sirma Mihaltcheva; Christopher Daum; Benjamin P. Bowen; Trent R. Northen; Michael T. Guarnieri; Shawn R. Starkenburg; Igor V. Grigoriev

doi:10.1038/s42003-021-01859-y

Communications Biology (Mar 2021)

A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology

Sara Calhoun,
Tisza Ann Szeremy Bell,
Lukas R. Dahlin,
Yuliya Kunde,
Kurt LaButti,
Katherine B. Louie,
Andrea Kuftin,
Daniel Treen,
David Dilworth,
Sirma Mihaltcheva,
Christopher Daum,
Benjamin P. Bowen,
Trent R. Northen,
Michael T. Guarnieri,
Shawn R. Starkenburg,
Igor V. Grigoriev

Affiliations

Sara Calhoun: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Tisza Ann Szeremy Bell: Applied Genomics Team, Bioscience Division, Los Alamos National Laboratory
Lukas R. Dahlin: National Bioenergy Center, National Renewable Energy Laboratory
Yuliya Kunde: Applied Genomics Team, Bioscience Division, Los Alamos National Laboratory
Kurt LaButti: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Katherine B. Louie: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Andrea Kuftin: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Daniel Treen: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
David Dilworth: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Sirma Mihaltcheva: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Christopher Daum: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Benjamin P. Bowen: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Trent R. Northen: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Michael T. Guarnieri: National Bioenergy Center, National Renewable Energy Laboratory
Shawn R. Starkenburg: Applied Genomics Team, Bioscience Division, Los Alamos National Laboratory
Igor V. Grigoriev: US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory

DOI: https://doi.org/10.1038/s42003-021-01859-y
Journal volume & issue: Vol. 4, no. 1
pp. 1 – 15

Abstract

Read online

Sara Calhoun, Tisza Ann Szeremy Bell, Lukas Dahlin and colleagues characterize the growth and biomass accumulation of a halotolerant microalga Scenedesmus sp. NREL 46B-D3. They sequenced the genome and profiled the transcriptomic and metabolomic response of this strain under high and low-temperature stress, and shed light on the genes involved in the metabolic and regulatory response to temperature stress.

Published in Communications Biology

ISSN: 2399-3642 (Online)
Publisher: Nature Portfolio
Country of publisher: United Kingdom
LCC subjects: Science: Biology (General)
Website: https://www.nature.com/commsbio/

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