Nature Communications (May 2022)

Nuclear oligo hashing improves differential analysis of single-cell RNA-seq

  • Hyeon-Jin Kim,
  • Greg Booth,
  • Lauren Saunders,
  • Sanjay Srivatsan,
  • José L. McFaline-Figueroa,
  • Cole Trapnell

DOI
https://doi.org/10.1038/s41467-022-30309-4
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 12

Abstract

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Using spike-in controls with current single cell RNA-seq platforms remains a challenge. Here, the authors use a mixture of short, unmodified DNA oligos as a normalization standard for sci-RNAseq to improve the detection of global transcriptome changes.