Genes (May 2023)

Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing

  • Thomas David Daniel Kazmirchuk,
  • Calvin Bradbury-Jost,
  • Taylor Ann Withey,
  • Tadesse Gessese,
  • Taha Azad,
  • Bahram Samanfar,
  • Frank Dehne,
  • Ashkan Golshani

DOI
https://doi.org/10.3390/genes14061194
Journal volume & issue
Vol. 14, no. 6
p. 1194

Abstract

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Leveraging computation in the development of peptide therapeutics has garnered increasing recognition as a valuable tool to generate novel therapeutics for disease-related targets. To this end, computation has transformed the field of peptide design through identifying novel therapeutics that exhibit enhanced pharmacokinetic properties and reduced toxicity. The process of in-silico peptide design involves the application of molecular docking, molecular dynamics simulations, and machine learning algorithms. Three primary approaches for peptide therapeutic design including structural-based, protein mimicry, and short motif design have been predominantly adopted. Despite the ongoing progress made in this field, there are still significant challenges pertaining to peptide design including: enhancing the accuracy of computational methods; improving the success rate of preclinical and clinical trials; and developing better strategies to predict pharmacokinetics and toxicity. In this review, we discuss past and present research pertaining to the design and development of in-silico peptide therapeutics in addition to highlighting the potential of computation and artificial intelligence in the future of disease therapeutics.

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