Tree Branch Skeleton Extraction from Drone-Based Photogrammetric Point Cloud

Abstract

Calculating the complex 3D traits of trees such as branch structure using drones/unmanned aerial vehicles (UAVs) with onboard RGB cameras is challenging because extracting branch skeletons from such image-generated sparse point clouds remains difficult. This paper proposes a skeleton extraction algorithm for the sparse point cloud generated by UAV RGB images with photogrammetry. We conducted a comparison experiment by flying a UAV from two altitudes (50 m and 20 m) above a university orchard with several fruit tree species and developed three metrics, namely the F1-score of bifurcation point (FBP), the F1-score of end point (FEP), and the Hausdorff distance (HD) to evaluate the performance of the proposed algorithm. The results show that the average values of FBP, FEP, and HD for the point cloud of fruit tree branches collected at 50 m altitude were 64.15%, 69.94%, and 0.0699, respectively, and those at 20 m were 83.24%, 84.66%, and 0.0474, respectively. This paper provides a branch skeleton extraction method for low-cost 3D digital management of orchards, which can effectively extract the main skeleton from the sparse fruit tree branch point cloud, can assist in analyzing the growth state of different types of fruit trees, and has certain practical application value in the management of orchards.

Keywords

• unmanned aerial vehicle
• tree phenotyping
• open software