npj Digital Medicine (Aug 2021)

iCOVID: interpretable deep learning framework for early recovery-time prediction of COVID-19 patients

  • Jun Wang,
  • Chen Liu,
  • Jingwen Li,
  • Cheng Yuan,
  • Lichi Zhang,
  • Cheng Jin,
  • Jianwei Xu,
  • Yaqi Wang,
  • Yaofeng Wen,
  • Hongbing Lu,
  • Biao Li,
  • Chang Chen,
  • Xiangdong Li,
  • Dinggang Shen,
  • Dahong Qian,
  • Jian Wang

DOI
https://doi.org/10.1038/s41746-021-00496-3
Journal volume & issue
Vol. 4, no. 1
pp. 1 – 13

Abstract

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Abstract Most prior studies focused on developing models for the severity or mortality prediction of COVID-19 patients. However, effective models for recovery-time prediction are still lacking. Here, we present a deep learning solution named iCOVID that can successfully predict the recovery-time of COVID-19 patients based on predefined treatment schemes and heterogeneous multimodal patient information collected within 48 hours after admission. Meanwhile, an interpretable mechanism termed FSR is integrated into iCOVID to reveal the features greatly affecting the prediction of each patient. Data from a total of 3008 patients were collected from three hospitals in Wuhan, China, for large-scale verification. The experiments demonstrate that iCOVID can achieve a time-dependent concordance index of 74.9% (95% CI: 73.6-76.3%) and an average day error of 4.4 days (95% CI: 4.2-4.6 days). Our study reveals that treatment schemes, age, symptoms, comorbidities, and biomarkers are highly related to recovery-time predictions.