IUCrJ (Sep 2018)

Bond orders for intermolecular interactions in crystals: charge transfer, ionicity and the effect on intramolecular bonds

  • Khidhir Alhameedi,
  • Amir Karton,
  • Dylan Jayatilaka,
  • Sajesh P. Thomas

DOI
https://doi.org/10.1107/S2052252518010758
Journal volume & issue
Vol. 5, no. 5
pp. 635 – 646

Abstract

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The question of whether intermolecular interactions in crystals originate from localized atom...atom interactions or as a result of holistic molecule...molecule close packing is a matter of continuing debate. In this context, the newly introduced Roby–Gould bond indices are reported for intermolecular `σ-hole' interactions, such as halogen bonding and chalcogen bonding, and compared with those for hydrogen bonds. A series of 97 crystal systems exhibiting these interaction motifs obtained from the Cambridge Structural Database (CSD) has been analysed. In contrast with conventional bond-order estimations, the new method separately estimates the ionic and covalent bond indices for atom...atom and molecule...molecule bond orders, which shed light on the nature of these interactions. A consistent trend in charge transfer from halogen/chalcogen bond-acceptor to bond-donor groups has been found in these intermolecular interaction regions via Hirshfeld atomic partitioning of the electron populations. These results, along with the `conservation of bond orders' tested in the interaction regions, establish the significant role of localized atom...atom interactions in the formation of these intermolecular binding motifs.

Keywords