Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes
Varun Bhaskar,
Alexandra Graff-Meyer,
Andreas D. Schenk,
Simone Cavadini,
Ottilie von Loeffelholz,
S. Kundhavai Natchiar,
Caroline G. Artus-Revel,
Hans-Rudolf Hotz,
Gabriel Bretones,
Bruno P. Klaholz,
Jeffrey A. Chao
Affiliations
Varun Bhaskar
Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland
Alexandra Graff-Meyer
Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland
Andreas D. Schenk
Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland
Simone Cavadini
Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland
Ottilie von Loeffelholz
Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC, CNRS, INSERM, Université de Strasbourg, 1 rue Laurent Fries, 67404 Illkirch, France; Institute of Genetics and of Molecular and Cellular Biology (IGBMC), 1 rue Laurent Fries, Illkirch, France; Centre National de la Recherche Scientifique (CNRS), UMR 7104, Illkirch, France; Institut National de la Santé et de la Recherche Médicale (INSERM), U964, Illkirch, France; Université de Strasbourg, Illkirch, France
S. Kundhavai Natchiar
Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC, CNRS, INSERM, Université de Strasbourg, 1 rue Laurent Fries, 67404 Illkirch, France; Institute of Genetics and of Molecular and Cellular Biology (IGBMC), 1 rue Laurent Fries, Illkirch, France; Centre National de la Recherche Scientifique (CNRS), UMR 7104, Illkirch, France; Institut National de la Santé et de la Recherche Médicale (INSERM), U964, Illkirch, France; Université de Strasbourg, Illkirch, France
Caroline G. Artus-Revel
Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland
Hans-Rudolf Hotz
Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland
Gabriel Bretones
Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias (IUOPA), Universidad de Oviedo, 33006 Oviedo, Spain
Bruno P. Klaholz
Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC, CNRS, INSERM, Université de Strasbourg, 1 rue Laurent Fries, 67404 Illkirch, France; Institute of Genetics and of Molecular and Cellular Biology (IGBMC), 1 rue Laurent Fries, Illkirch, France; Centre National de la Recherche Scientifique (CNRS), UMR 7104, Illkirch, France; Institut National de la Santé et de la Recherche Médicale (INSERM), U964, Illkirch, France; Université de Strasbourg, Illkirch, France
Jeffrey A. Chao
Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland; Corresponding author
Summary: Ribosomes undergo multiple conformational transitions during translation elongation. Here, we report the high-resolution cryoelectron microscopy (cryo-EM) structure of the human 80S ribosome in the post-decoding pre-translocation state (classical-PRE) at 3.3-Å resolution along with the rotated (hybrid-PRE) and the post-translocation states (POST). The classical-PRE state ribosome structure reveals a previously unobserved interaction between the C-terminal region of the conserved ribosomal protein uS19 and the A- and P-site tRNAs and the mRNA in the decoding site. In addition to changes in the inter-subunit bridges, analysis of different ribosomal conformations reveals the dynamic nature of this domain and suggests a role in tRNA accommodation and translocation during elongation. Furthermore, we show that disease-associated mutations in uS19 result in increased frameshifting. Together, this structure-function analysis provides mechanistic insights into the role of the uS19 C-terminal tail in the context of mammalian ribosomes. : In this study, Bhaskar et al. visualize the dynamic rearrangement of the uS19 C-terminal tail during translation elongation and elucidate its role in stabilizing aminoacyl tRNA and decoding interactions and in coordination of peptidyl tRNA movements within the mammalian ribosome during protein synthesis. Keywords: ribosome, uS19 protein, translational accuracy, single-particle cryo-EM