eLife (Jul 2016)

Circadian RNA expression elicited by 3’-UTR IRAlu-paraspeckle associated elements

  • Manon Torres,
  • Denis Becquet,
  • Marie-Pierre Blanchard,
  • Séverine Guillen,
  • Bénédicte Boyer,
  • Mathias Moreno,
  • Jean-Louis Franc,
  • Anne-Marie François-Bellan

DOI
https://doi.org/10.7554/eLife.14837
Journal volume & issue
Vol. 5

Abstract

Read online

Paraspeckles are nuclear bodies form around the long non-coding RNA, Neat1, and RNA-binding proteins. While their role is not fully understood, they are believed to control gene expression at a post-transcriptional level by means of the nuclear retention of mRNA containing in their 3’-UTR inverted repeats of Alu sequences (IRAlu). In this study, we found that, in pituitary cells, all components of paraspeckles including four major proteins and Neat1 displayed a circadian expression pattern. Furthermore the insertion of IRAlu at the 3’-UTR of the EGFP cDNA led to a rhythmic circadian nuclear retention of the egfp mRNA that was lost when paraspeckles were disrupted whereas insertion of a single antisense Alu had only a weak effect. Using real-time video-microscopy, these IRAlu were further shown to drive a circadian expression of EGFP protein. This study shows that paraspeckles, thanks to their circadian expression, control circadian gene expression at a post-transcriptional level.

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