PLoS Computational Biology (Jan 2021)

Chemical graph generators.

  • Mehmet Aziz Yirik,
  • Christoph Steinbeck

DOI
https://doi.org/10.1371/journal.pcbi.1008504
Journal volume & issue
Vol. 17, no. 1
p. e1008504

Abstract

Read online

Chemical graph generators are software packages to generate computer representations of chemical structures adhering to certain boundary conditions. Their development is a research topic of cheminformatics. Chemical graph generators are used in areas such as virtual library generation in drug design, in molecular design with specified properties, called inverse QSAR/QSPR, as well as in organic synthesis design, retrosynthesis or in systems for computer-assisted structure elucidation (CASE). CASE systems again have regained interest for the structure elucidation of unknowns in computational metabolomics, a current area of computational biology.