Data
(Jun 2022)
EndoNuke: Nuclei Detection Dataset for Estrogen and Progesterone Stained IHC Endometrium Scans
Anton Naumov,
Egor Ushakov,
Andrey Ivanov,
Konstantin Midiber,
Tatyana Khovanskaya,
Alexandra Konyukova,
Polina Vishnyakova,
Sergei Nora,
Liudmila Mikhaleva,
Timur Fatkhudinov,
Evgeny Karpulevich
Affiliations
Anton Naumov
Information Systems Department, Ivannikov Institute for System Programming, Russian Academy of Sciences (ISP RAS), 109004 Moscow, Russia
Egor Ushakov
Information Systems Department, Ivannikov Institute for System Programming, Russian Academy of Sciences (ISP RAS), 109004 Moscow, Russia
Andrey Ivanov
Information Systems Department, Ivannikov Institute for System Programming, Russian Academy of Sciences (ISP RAS), 109004 Moscow, Russia
Konstantin Midiber
A.P. Avtsyn Scientific Research Institute of Human Morphology, 117418 Moscow, Russia
Tatyana Khovanskaya
A.P. Avtsyn Scientific Research Institute of Human Morphology, 117418 Moscow, Russia
Alexandra Konyukova
A.P. Avtsyn Scientific Research Institute of Human Morphology, 117418 Moscow, Russia
Polina Vishnyakova
Medical Institute, Peoples’ Friendship University of Russia (RUDN University), 117198 Moscow, Russia
Sergei Nora
Department of Microbiology, Immunology and Infectious Diseases, Yaroslav-the-Wise Novgorod State University, 173003 Veliky Novgorod, Russia
Liudmila Mikhaleva
A.P. Avtsyn Scientific Research Institute of Human Morphology, 117418 Moscow, Russia
Timur Fatkhudinov
A.P. Avtsyn Scientific Research Institute of Human Morphology, 117418 Moscow, Russia
Evgeny Karpulevich
Information Systems Department, Ivannikov Institute for System Programming, Russian Academy of Sciences (ISP RAS), 109004 Moscow, Russia
DOI
https://doi.org/10.3390/data7060075
Journal volume & issue
Vol. 7,
no. 6
Abstract
Read online
We present EndoNuke, an open dataset consisting of tiles from endometrium immunohistochemistry slides with the nuclei annotated as keypoints. Several experts with various experience have annotated the dataset. Apart from gathering the data and creating the annotation, we have performed an agreement study and analyzed the distribution of nuclei staining intensity.
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