Scientific Data (Mar 2022)
PET-BIDS, an extension to the brain imaging data structure for positron emission tomography
- Martin Norgaard,
- Granville J. Matheson,
- Hanne D. Hansen,
- Adam Thomas,
- Graham Searle,
- Gaia Rizzo,
- Mattia Veronese,
- Alessio Giacomel,
- Maqsood Yaqub,
- Matteo Tonietto,
- Thomas Funck,
- Ashley Gillman,
- Hugo Boniface,
- Alexandre Routier,
- Jelle R. Dalenberg,
- Tobey Betthauser,
- Franklin Feingold,
- Christopher J. Markiewicz,
- Krzysztof J. Gorgolewski,
- Ross W. Blair,
- Stefan Appelhoff,
- Remi Gau,
- Taylor Salo,
- Guiomar Niso,
- Cyril Pernet,
- Christophe Phillips,
- Robert Oostenveld,
- Jean-Dominique Gallezot,
- Richard E. Carson,
- Gitte M. Knudsen,
- Robert B. Innis,
- Melanie Ganz
Affiliations
- Martin Norgaard
- Neurobiology Research Unit, Rigshospitalet, and Institute of Clinical Medicine, Univ. Copenhagen
- Granville J. Matheson
- Department of Psychiatry, Columbia University
- Hanne D. Hansen
- Neurobiology Research Unit, Rigshospitalet, and Institute of Clinical Medicine, Univ. Copenhagen
- Adam Thomas
- Intramural Research Program, NIMH
- Graham Searle
- Invicro and Division of Brain Sciences, Imperial College London
- Gaia Rizzo
- Invicro and Division of Brain Sciences, Imperial College London
- Mattia Veronese
- Centre for Neuroimaging Sciences, King’s College London
- Alessio Giacomel
- Centre for Neuroimaging Sciences, King’s College London
- Maqsood Yaqub
- Amsterdam UMC, location VUmc, department of radiology and nuclear medicine
- Matteo Tonietto
- Université Paris-Saclay, CEA, CNRS, Inserm, BioMaps, Service Hospitalier Frédéric Joliot
- Thomas Funck
- INM-1, Jülich Forschungszentrum
- Ashley Gillman
- Aust. e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation
- Hugo Boniface
- Centre d’Acquisition et de Traitement des Images, CEA
- Alexandre Routier
- Inria, Aramis project-team, Sorbonne Université, Institut du Cerveau - Paris Brain Institute - ICM, Inserm, CNRS, AP-HP, Hôpital de la Pitié Salpêtriére
- Jelle R. Dalenberg
- Department of Neurology, University of Groningen, University Medical Center Groningen
- Tobey Betthauser
- Wisconsin Alzheimer’s Disease Research Center, Division of Geriatrics, Department of Medicine, University of Wisconsin-Madison School of Medicine and Public Health
- Franklin Feingold
- Department of Psychology, Stanford University
- Christopher J. Markiewicz
- Department of Psychology, Stanford University
- Krzysztof J. Gorgolewski
- Department of Psychology, Stanford University
- Ross W. Blair
- Department of Psychology, Stanford University
- Stefan Appelhoff
- Center for Adaptive Rationality, Max Planck Institute for Human Development
- Remi Gau
- Institute of psychology, Université catholique de Louvain
- Taylor Salo
- Department of Psychology, Florida International University
- Guiomar Niso
- Psychological Brain Sciences, Indiana University
- Cyril Pernet
- Neurobiology Research Unit, Rigshospitalet, and Institute of Clinical Medicine, Univ. Copenhagen
- Christophe Phillips
- GIGA Cyclotron Research Centre in vivo imaging, University of Liege
- Robert Oostenveld
- Donders Institute for Brain, Cognition and Behaviour, Radboud University
- Jean-Dominique Gallezot
- Department of Radiology and Biomedical Imaging, Yale University
- Richard E. Carson
- Department of Radiology and Biomedical Imaging, Yale University
- Gitte M. Knudsen
- Neurobiology Research Unit, Rigshospitalet, and Institute of Clinical Medicine, Univ. Copenhagen
- Robert B. Innis
- Molecular Imaging Branch, National Institute of Mental Health, National Institutes of Health
- Melanie Ganz
- Neurobiology Research Unit, Rigshospitalet, and Institute of Clinical Medicine, Univ. Copenhagen
- DOI
- https://doi.org/10.1038/s41597-022-01164-1
- Journal volume & issue
-
Vol. 9,
no. 1
pp. 1 – 7
Abstract
The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets, serving not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data, also known as PET-BIDS, and share several open-access datasets curated following PET-BIDS along with tools for conversion, validation and analysis of PET-BIDS datasets.
