Communications Biology (Mar 2021)

Whole-organ analysis of TGF-β-mediated remodelling of the tumour microenvironment by tissue clearing

  • Shimpei I. Kubota,
  • Kei Takahashi,
  • Tomoyuki Mano,
  • Katsuhiko Matsumoto,
  • Takahiro Katsumata,
  • Shoi Shi,
  • Kazuki Tainaka,
  • Hiroki R. Ueda,
  • Shogo Ehata,
  • Kohei Miyazono

DOI
https://doi.org/10.1038/s42003-021-01786-y
Journal volume & issue
Vol. 4, no. 1
pp. 1 – 15

Abstract

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Shimpei Kubota et al. describe a pipeline for quantitative whole-organ analysis that that combines tissue clearing, 3D imaging, and machine learning for analysis of the tumour microenvironment. The authors apply this in a mouse model of lung tumour and reveal the role of TGF-β in remodelling the cellular microenvironment favouring metastatic invasion.