Cell-Type-Specific Complement Expression in the Healthy and Diseased Retina
Diana Pauly,
Divyansh Agarwal,
Nicholas Dana,
Nicole Schäfer,
Josef Biber,
Kirsten A. Wunderlich,
Yassin Jabri,
Tobias Straub,
Nancy R. Zhang,
Avneesh K. Gautam,
Bernhard H.F. Weber,
Stefanie M. Hauck,
Mijin Kim,
Christine A. Curcio,
Dwight Stambolian,
Mingyao Li,
Antje Grosche
Affiliations
Diana Pauly
Experimental Ophthalmology, University Hospital Regensburg, Regensburg 93053, Germany; Corresponding author
Divyansh Agarwal
Genomics and Computational Biology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA
Nicholas Dana
Department of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA
Nicole Schäfer
Experimental Ophthalmology, University Hospital Regensburg, Regensburg 93053, Germany
Josef Biber
Department of Physiological Genomics, Biomedical Center, Ludwig Maximilians University Munich, Planegg-Martinsried 82152, Germany
Kirsten A. Wunderlich
Department of Physiological Genomics, Biomedical Center, Ludwig Maximilians University Munich, Planegg-Martinsried 82152, Germany
Yassin Jabri
Experimental Ophthalmology, University Hospital Regensburg, Regensburg 93053, Germany
Tobias Straub
Core Facility Bioinformatics, Biomedical Center, Ludwig Maximilians University Munich, Planegg-Martinsried 82152, Germany
Nancy R. Zhang
Department of Statistics, The Wharton School, University of Pennsylvania, Philadelphia, PA 19104, USA
Avneesh K. Gautam
Department of Medicine, Immunology and Allergy, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA 02115, USA
Bernhard H.F. Weber
Institute of Human Genetics, University of Regensburg, Regensburg 93053, Germany
Stefanie M. Hauck
Research Unit Protein Science, Helmholtz Center Munich, Research Center for Environmental Health (GmbH), Munich 80939, Germany
Mijin Kim
Department of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA
Christine A. Curcio
Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35294-0019, USA
Dwight Stambolian
Department of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA
Mingyao Li
Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
Antje Grosche
Department of Physiological Genomics, Biomedical Center, Ludwig Maximilians University Munich, Planegg-Martinsried 82152, Germany; Corresponding author
Summary: Complement dysregulation is a feature of many retinal diseases, yet mechanistic understanding at the cellular level is limited. Given this knowledge gap about which retinal cells express complement, we performed single-cell RNA sequencing on ∼92,000 mouse retinal cells and validated our results in five major purified retinal cell types. We found evidence for a distributed cell-type-specific complement expression across 11 cell types. Notably, Müller cells are the major contributor of complement activators c1s, c3, c4, and cfb. Retinal pigment epithelium (RPE) mainly expresses cfh and the terminal complement components, whereas cfi and cfp transcripts are most abundant in neurons. Aging enhances c1s, cfb, cfp, and cfi expression, while cfh expression decreases. Transient retinal ischemia increases complement expression in microglia, Müller cells, and RPE. In summary, we report a unique complement expression signature for murine retinal cell types suggesting a well-orchestrated regulation of local complement expression in the retinal microenvironment. : Overshooting complement activity contributes to retinal degeneration. Pauly et al. demonstrate a distinct complement expression profile of retinal cell types that changes with aging and during retinal degeneration. This prompts the intriguing concept of a local retinal complement activation possibly independent of the systemic components typically produced by the liver. keywords: complement expression, retina, eye, classical, alternative, lectin, Müller cell, neuron, ischemia, age-dependent