Mitochondrial DNA. Part B. Resources (Dec 2017)

Chloroplast genome of the wild tuber-bearing diploid potato relative Solanum chacoense

  • Kwang-Soo Cho,
  • Jang-Gyu Choi,
  • Ji-Hong Cho,
  • Ju-Sung Im,
  • Young-Eun Park,
  • Su-Young Hong,
  • Tae-Ho Park

DOI
https://doi.org/10.1080/23802359.2017.1413309
Journal volume & issue
Vol. 2, no. 2
pp. 915 – 917

Abstract

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Solanum chacoense is a wild tuber-bearing species belonging to Solanaceae family. The chloroplast genome of the species was completed by de novo assembly using a small amount of whole genome sequencing data. The genome is the circular DNA molecule with a length of 155,532 bp containing 159 predicted genes totally, including 105 protein-coding, 45 tRNA and eight rRNA genes. Maximum-likelihood phylogenetic analysis with 26 species in Solanaceae revealed that S. chacoense is the most closely grouped with S. commersonii.

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