Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion
Timothy W Dunn,
Yu Mu,
Sujatha Narayan,
Owen Randlett,
Eva A Naumann,
Chao-Tsung Yang,
Alexander F Schier,
Jeremy Freeman,
Florian Engert,
Misha B Ahrens
Affiliations
Timothy W Dunn
Department of Molecular and Cellular Biology, Harvard University, Cambridge, United States; Program in Neuroscience, Department of Neurobiology, Harvard Medical School, Boston, United States; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
Yu Mu
Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
Sujatha Narayan
Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
Department of Molecular and Cellular Biology, Harvard University, Cambridge, United States; Department of Neuroscience, Physiology and Pharmacology, University College London, London, United Kingdom
Chao-Tsung Yang
Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
Department of Molecular and Cellular Biology, Harvard University, Cambridge, United States; Program in Neuroscience, Department of Neurobiology, Harvard Medical School, Boston, United States
Jeremy Freeman
Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
Department of Molecular and Cellular Biology, Harvard University, Cambridge, United States; Program in Neuroscience, Department of Neurobiology, Harvard Medical School, Boston, United States
In the absence of salient sensory cues to guide behavior, animals must still execute sequences of motor actions in order to forage and explore. How such successive motor actions are coordinated to form global locomotion trajectories is unknown. We mapped the structure of larval zebrafish swim trajectories in homogeneous environments and found that trajectories were characterized by alternating sequences of repeated turns to the left and to the right. Using whole-brain light-sheet imaging, we identified activity relating to the behavior in specific neural populations that we termed the anterior rhombencephalic turning region (ARTR). ARTR perturbations biased swim direction and reduced the dependence of turn direction on turn history, indicating that the ARTR is part of a network generating the temporal correlations in turn direction. We also find suggestive evidence for ARTR mutual inhibition and ARTR projections to premotor neurons. Finally, simulations suggest the observed turn sequences may underlie efficient exploration of local environments.