Nature Communications (May 2021)
Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics
- Ling Xu,
- Zhaobin Dong,
- Dawn Chiniquy,
- Grady Pierroz,
- Siwen Deng,
- Cheng Gao,
- Spencer Diamond,
- Tuesday Simmons,
- Heidi M.-L. Wipf,
- Daniel Caddell,
- Nelle Varoquaux,
- Mary A. Madera,
- Robert Hutmacher,
- Adam Deutschbauer,
- Jeffery A. Dahlberg,
- Mary Lou Guerinot,
- Elizabeth Purdom,
- Jillian F. Banfield,
- John W. Taylor,
- Peggy G. Lemaux,
- Devin Coleman-Derr
Affiliations
- Ling Xu
- Department of Plant and Microbial Biology, University of California
- Zhaobin Dong
- Department of Plant and Microbial Biology, University of California
- Dawn Chiniquy
- Department of Energy, Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory
- Grady Pierroz
- Department of Plant and Microbial Biology, University of California
- Siwen Deng
- Department of Plant and Microbial Biology, University of California
- Cheng Gao
- Department of Plant and Microbial Biology, University of California
- Spencer Diamond
- Department of Earth and Planetary Science, University of California
- Tuesday Simmons
- Department of Plant and Microbial Biology, University of California
- Heidi M.-L. Wipf
- Department of Plant and Microbial Biology, University of California
- Daniel Caddell
- Plant Gene Expression Center, USDA-ARS
- Nelle Varoquaux
- CNRS, University Grenoble Alpes, TIMC-IMAG
- Mary A. Madera
- Department of Plant and Microbial Biology, University of California
- Robert Hutmacher
- Westside Research & Extension Center, UC Department of Plant Sciences, University of California
- Adam Deutschbauer
- Department of Energy, Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory
- Jeffery A. Dahlberg
- Kearney Agricultural Research & Extension Center
- Mary Lou Guerinot
- Department of Biological Scienes, Dartmouth College
- Elizabeth Purdom
- Department of Statistics, University of California
- Jillian F. Banfield
- Department of Earth and Planetary Science, University of California
- John W. Taylor
- Department of Plant and Microbial Biology, University of California
- Peggy G. Lemaux
- Department of Plant and Microbial Biology, University of California
- Devin Coleman-Derr
- Department of Plant and Microbial Biology, University of California
- DOI
- https://doi.org/10.1038/s41467-021-23553-7
- Journal volume & issue
-
Vol. 12,
no. 1
pp. 1 – 17
Abstract
Advances in omics provide a tool to understand mechanisms for plant–microbial interactions under stress. Here the authors apply genome-resolved metagenomics to investigate sorghum and its microbiome responses to drought, identifying an unexpected role of iron metabolism.
