Nature Communications (Apr 2020)

MethCORR modelling of methylomes from formalin-fixed paraffin-embedded tissue enables characterization and prognostication of colorectal cancer

  • Trine B. Mattesen,
  • Mads H. Rasmussen,
  • Juan Sandoval,
  • Halit Ongen,
  • Sigrid S. Árnadóttir,
  • Josephine Gladov,
  • Anna Martinez-Cardus,
  • Manuel Castro de Moura,
  • Anders H. Madsen,
  • Søren Laurberg,
  • Emmanouil T. Dermitzakis,
  • Manel Esteller,
  • Claus L. Andersen,
  • Jesper B. Bramsen

DOI
https://doi.org/10.1038/s41467-020-16000-6
Journal volume & issue
Vol. 11, no. 1
pp. 1 – 15

Abstract

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Molecular analysis of archival formalin-fixed clinical tissues can be difficult. Here, researchers have developed MethCORR, an approach that infers gene expression from DNA methylation data and use the approach for molecular characterization and prognostication of colorectal cancer using archival samples.