Dataset of genome identification and characterization of microsatellite markers loci in Atriplex atacamensis and Atriplex deserticola
Francisco Correa,
Jorge Pérez-Díaz,
Pamela Rojas,
Claudia Torres,
Manuel Paneque,
Boris Sagredo,
Adriana Bastías
Affiliations
Francisco Correa
Laboratorio de Biotecnología y Recursos Naturales, Instituto de Investigaciones Agropecuarias (INIA) CRI Rayentué, Rengo, Postal code: 2940000, Chile
Jorge Pérez-Díaz
Laboratorio de Biotecnología y Recursos Naturales, Instituto de Investigaciones Agropecuarias (INIA) CRI Rayentué, Rengo, Postal code: 2940000, Chile
Pamela Rojas
Laboratorio de Biotecnología y Recursos Naturales, Instituto de Investigaciones Agropecuarias (INIA) CRI Rayentué, Rengo, Postal code: 2940000, Chile
Claudia Torres
Facultad de Ciencias Agronómicas, Universidad de Chile, La Pintana, Santiago de Chile, Postal code: 8820000, Chile
Manuel Paneque
Facultad de Ciencias Agronómicas, Universidad de Chile, La Pintana, Santiago de Chile, Postal code: 8820000, Chile
Boris Sagredo
Laboratorio de Biotecnología y Recursos Naturales, Instituto de Investigaciones Agropecuarias (INIA) CRI Rayentué, Rengo, Postal code: 2940000, Chile
Adriana Bastías
Facultad de Ciencias de la Salud, Instituto de Ciencias Biomédicas, Universidad Autónoma de Chile, Providencia, Santiago de Chile, Postal Code: 7500000, Chile; Corresponding author.
In this work, we partially sequenced genomes of two Atriplex species (A. deserticola Phil. and A. atacamensis Phil.), using Illumina technology (Hiseq 2500 paired-end system) and de novo assembly strategy. Raw data of A. deserticola and A. atacamensis are available from NCBI-Bioproject, PRJNA495747 and PRJNA495763 accessions, respectively. A total of 127086 and 134984 microsatellite or simple sequence repeat (SSR) markers were identified within A. deserticola and A. atacamensis genomic DNA, respectively. In addition, predicted putative genes in A. deserticola and A. atacamensis sequences are also presented in this article. Keywords: Atriplex, SSR, Microsatellite, Molecular markers, Simple sequence repeat
